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dbVar

Database of genomic structural variation

nsv499711

Organism: Homo sapiens

Study:nstd47 (Kidd et al. 2010b)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:71,561

Publication(s):Kidd et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 837 SVs from 76 studies. See in: genome view

Remapped(Score: Perfect):105,096,412-105,167,972

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv499711	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	105,096,412	105,167,972
nsv499711	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	104,432,113	104,503,673
nsv499711	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000005.8	Chr5	104,460,012	104,531,572

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv585959	copy number loss	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv585959	Remapped	Perfect	NC_000005.10:g.105 096412_105167972de l	GRCh38.p12	First Pass	NC_000005.10	Chr5	105,096,412	105,167,972
nssv585959	Remapped	Perfect	NC_000005.9:g.1044 32113_104503673del	GRCh37.p13	First Pass	NC_000005.9	Chr5	104,432,113	104,503,673
nssv585959	Submitted genomic		NC_000005.8:g.1044 60012_104531572del	NCBI36 (hg18)		NC_000005.8	Chr5	104,460,012	104,531,572

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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