nsv5029373
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:184,177
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 712 SVs from 64 studies. See in: genome view
Overlapping variant regions from other studies: 716 SVs from 64 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5029373 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000021.9 | Chr21 | 34,350,120 | 34,534,296 | ||
| nsv5029373 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000021.8 | Chr21 | 35,722,419 | 35,906,594 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16592499 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16592499 | Submitted genomic | NC_000021.9:g.3435 0120_34534296dup | GRCh38 (hg38) | NC_000021.9 | Chr21 | 34,350,120 | 34,534,296 | ||
| nssv16592499 | Remapped | Good | NC_000021.8:g.3572 2419_35906594dup | GRCh37.p13 | First Pass | NC_000021.8 | Chr21 | 35,722,419 | 35,906,594 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16592499 | <0.001 | 8 | 29246 |