nsv511041
- Organism: Homo sapiens
- Study:nstd49 (Teague et al. 2010)
- Variant Type:inversion
- Method Type:Optical mapping
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:326,215
- Publication(s):Teague et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 6269 SVs from 112 studies. See in: genome view
Overlapping variant regions from other studies: 6531 SVs from 115 studies. See in: genome view
Overlapping variant regions from other studies: 545 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv511041 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 21,981,568 | 22,307,782 |
| nsv511041 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 22,269,519 | 22,595,733 |
| nsv511041 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000015.8 | Chr15 | 19,770,883 | 20,097,097 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv622410 | inversion | GM10860 | Optical mapping | Optical mapping | 1,998 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv622410 | Remapped | Perfect | NC_000015.10:g.(21 981568_?)_(?_22307 782)inv | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 21,981,568 | 22,307,782 |
| nssv622410 | Remapped | Perfect | NC_000015.9:g.(222 69519_?)_(?_225957 33)inv | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 22,269,519 | 22,595,733 |
| nssv622410 | Submitted genomic | NC_000015.8:g.(197 70883_?)_(?_200970 97)inv | NCBI35 (hg17) | NC_000015.8 | Chr15 | 19,770,883 | 20,097,097 |