nsv511087
- Organism: Homo sapiens
- Study:nstd49 (Teague et al. 2010)
- Variant Type:complex substitution
- Method Type:Optical mapping
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:47,395
- Publication(s):Teague et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 545 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 510 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 35 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv511087 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 140,978,381 | - | 141,025,775 |
| nsv511087 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | - | 140,084,056 | 140,119,951 |
| nsv511087 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000023.8 | ChrX | 139,786,066 | - | 139,845,471 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|---|---|
| nssv618688 | complex substitution | CHM | Optical mapping | Optical mapping | Hydatidiform Mole | not provided | Submitter | 1,350 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv618688 | Remapped | Pass | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 140,978,381 | - | 141,025,775 |
| nssv618688 | Remapped | Pass | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | - | 140,084,056 | 140,119,951 |
| nssv618688 | Submitted genomic | NCBI35 (hg17) | NC_000023.8 | ChrX | 139,786,066 | - | 139,845,471 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | Sample ID | Type | Subject Phenotype | Clinical Interpretation | Source of Interpretation | Gender | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|---|
| nssv618688 | CHM | complex substitution | Hydatidiform Mole | not provided | Submitter | Female | 1,350 |