nsv513582
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,147
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 174 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 176 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 83 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv513582 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 17,368,440 | 17,370,586 |
| nsv513582 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 17,849,339 | 17,850,527 |
| nsv513582 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 16,229,339 | 16,230,527 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626834 | insertion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv626834 | Remapped | Pass | NC_000022.11:g.(17 368440_?)_(?_17370 586)ins1057 | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 17,368,440 | 17,370,586 |
| nssv626834 | Remapped | Perfect | NC_000022.10:g.(17 849339_?)_(?_17850 527)ins1057 | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 17,849,339 | 17,850,527 |
| nssv626834 | Submitted genomic | NC_000022.9:g.(162 29339_?)_(?_162305 27)ins1057 | NCBI36 (hg18) | NC_000022.9 | Chr22 | 16,229,339 | 16,230,527 |