nsv513583
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,275
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 202 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 84 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv513583 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 17,408,609 | 17,410,883 |
| nsv513583 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000022.10 | Chr22 | 17,888,505 | 17,889,930 |
| nsv513583 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000022.9 | Chr22 | 16,268,505 | 16,269,930 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626835 | insertion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv626835 | Remapped | Pass | NC_000022.11:g.(17 408609_?)_(?_17410 883)ins954 | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 17,408,609 | 17,410,883 |
| nssv626835 | Remapped | Perfect | NC_000022.10:g.(17 888505_?)_(?_17889 930)ins954 | GRCh37.p13 | First Pass | NC_000022.10 | Chr22 | 17,888,505 | 17,889,930 |
| nssv626835 | Submitted genomic | NC_000022.9:g.(162 68505_?)_(?_162699 30)ins954 | NCBI36 (hg18) | NC_000022.9 | Chr22 | 16,268,505 | 16,269,930 |