nsv513639
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:41,174
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 612 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 617 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 281 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv513639 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 247,127,725 | 247,168,898 |
| nsv513639 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 247,291,027 | 247,332,200 |
| nsv513639 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000001.9 | Chr1 | 245,357,650 | 245,398,823 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626891 | inversion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv626891 | Remapped | Perfect | NC_000001.11:g.(24 7127725_?)_(?_2471 68898)inv41174 | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 247,127,725 | 247,168,898 |
| nssv626891 | Remapped | Perfect | NC_000001.10:g.(24 7291027_?)_(?_2473 32200)inv41174 | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 247,291,027 | 247,332,200 |
| nssv626891 | Submitted genomic | NC_000001.9:g.(245 357650_?)_(?_24539 8823)inv41174 | NCBI36 (hg18) | NC_000001.9 | Chr1 | 245,357,650 | 245,398,823 |