nsv513646
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:15,078
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 213 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 213 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 93 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv513646 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 233,562,758 | 233,577,835 | - |
| nsv513646 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 234,471,404 | 234,487,994 | - |
| nsv513646 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000002.10 | Chr2 | 234,134,502 | - | 234,151,195 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626898 | inversion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nssv626898 | Remapped | Pass | NC_000002.12:g.(23 3562758_?)_(233577 835_?)inv16694 | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 233,562,758 | 233,577,835 | - |
| nssv626898 | Remapped | Good | NC_000002.11:g.(23 4471404_?)_(234487 994_?)inv16694 | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 234,471,404 | 234,487,994 | - |
| nssv626898 | Submitted genomic | NC_000002.10:g.(23 4134502_?)_(?_2341 51195)inv16694 | NCBI36 (hg18) | NC_000002.10 | Chr2 | 234,134,502 | - | 234,151,195 |