nsv513649
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:10,604
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 112 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 30 studies. See in: genome view
Overlapping variant regions from other studies: 26 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv513649 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 50,886,877 | 50,897,480 |
| nsv513649 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 50,925,455 | 50,936,059 |
| nsv513649 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 50,899,327 | 50,909,932 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626901 | inversion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv626901 | Remapped | Good | NC_000003.12:g.(50 886877_?)_(?_50897 480)inv10606 | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 50,886,877 | 50,897,480 |
| nssv626901 | Remapped | Good | NC_000003.11:g.(50 925455_?)_(?_50936 059)inv10606 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 50,925,455 | 50,936,059 |
| nssv626901 | Submitted genomic | NC_000003.10:g.(50 899327_?)_(?_50909 932)inv10606 | NCBI36 (hg18) | NC_000003.10 | Chr3 | 50,899,327 | 50,909,932 |