nsv513699
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,083
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 181 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 181 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 18 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv513699 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 80,452,420 | 80,465,502 |
| nsv513699 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000012.11 | Chr12 | 80,846,200 | 80,859,281 |
| nsv513699 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000012.10 | Chr12 | 79,370,331 | 79,383,412 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626951 | inversion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv626951 | Remapped | Good | NC_000012.12:g.(80 452420_?)_(?_80465 502)inv13082 | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 80,452,420 | 80,465,502 |
| nssv626951 | Remapped | Perfect | NC_000012.11:g.(80 846200_?)_(?_80859 281)inv13082 | GRCh37.p13 | First Pass | NC_000012.11 | Chr12 | 80,846,200 | 80,859,281 |
| nssv626951 | Submitted genomic | NC_000012.10:g.(79 370331_?)_(?_79383 412)inv13082 | NCBI36 (hg18) | NC_000012.10 | Chr12 | 79,370,331 | 79,383,412 |