nsv513725
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:5,586
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 464 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 462 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 207 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv513725 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 49,157,424 | 49,163,009 |
| nsv513725 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 49,013,762 | 49,019,347 |
| nsv513725 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 48,900,706 | 48,906,291 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626977 | inversion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv626977 | Remapped | Perfect | NC_000023.11:g.(49 157424_?)_(?_49163 009)inv5586 | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 49,157,424 | 49,163,009 |
| nssv626977 | Remapped | Perfect | NC_000023.10:g.(49 013762_?)_(?_49019 347)inv5586 | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 49,013,762 | 49,019,347 |
| nssv626977 | Submitted genomic | NC_000023.9:g.(489 00706_?)_(?_489062 91)inv5586 | NCBI36 (hg18) | NC_000023.9 | ChrX | 48,900,706 | 48,906,291 |