nsv514883
- Organism: Homo sapiens
- Study:nstd46 (Campbell et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:27
- Validation:Not tested
- Clinical Assertions: No
- Region Size:20,769
- Publication(s):Campbell et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 581 SVs from 64 studies. See in: genome view
Overlapping variant regions from other studies: 581 SVs from 64 studies. See in: genome view
Overlapping variant regions from other studies: 256 SVs from 23 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv514883 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nsv514883 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nsv514883 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv2837523 | copy number loss | NA18487 | Oligo aCGH | Probe signal intensity | 1 | 482 |
| nssv2837524 | copy number loss | NA18489 | Oligo aCGH | Probe signal intensity | 1 | 459 |
| nssv2837525 | copy number loss | NA18501 | Oligo aCGH | Probe signal intensity | 1 | 478 |
| nssv2837526 | copy number loss | NA18503 | Oligo aCGH | Probe signal intensity | 1 | 493 |
| nssv2837527 | copy number loss | NA18504 | Oligo aCGH | Probe signal intensity | 1 | 476 |
| nssv2837528 | copy number loss | NA18518 | Oligo aCGH | Probe signal intensity | 1 | 458 |
| nssv2837529 | copy number loss | NA18519 | Oligo aCGH | Probe signal intensity | 1 | 461 |
| nssv2837530 | copy number loss | NA18855 | Oligo aCGH | Probe signal intensity | 1 | 446 |
| nssv2837531 | copy number loss | NA18862 | Oligo aCGH | Probe signal intensity | 1 | 485 |
| nssv2837532 | copy number loss | NA19116 | Oligo aCGH | Probe signal intensity | 1 | 449 |
| nssv2837533 | copy number loss | NA19119 | Oligo aCGH | Probe signal intensity | 1 | 469 |
| nssv2837534 | copy number loss | NA19120 | Oligo aCGH | Probe signal intensity | 1 | 457 |
| nssv2837535 | copy number loss | NA19121 | Oligo aCGH | Probe signal intensity | 1 | 468 |
| nssv2837536 | copy number loss | NA19123 | Oligo aCGH | Probe signal intensity | 1 | 471 |
| nssv2837537 | copy number loss | NA19128 | Oligo aCGH | Probe signal intensity | 1 | 499 |
| nssv2837538 | copy number loss | NA19129 | Oligo aCGH | Probe signal intensity | 1 | 465 |
| nssv2837539 | copy number loss | NA19141 | Oligo aCGH | Probe signal intensity | 1 | 480 |
| nssv2837540 | copy number loss | NA19149 | Oligo aCGH | Probe signal intensity | 1 | 447 |
| nssv2837541 | copy number loss | NA19151 | Oligo aCGH | Probe signal intensity | 1 | 451 |
| nssv2837542 | copy number loss | NA19184 | Oligo aCGH | Probe signal intensity | 1 | 481 |
| nssv2837543 | copy number loss | NA19190 | Oligo aCGH | Probe signal intensity | 1 | 434 |
| nssv2837544 | copy number loss | NA19191 | Oligo aCGH | Probe signal intensity | 1 | 477 |
| nssv2837545 | copy number loss | NA19240 | Oligo aCGH | Probe signal intensity | 1 | 479 |
| nssv2837546 | copy number loss | NA21475 | Oligo aCGH | Probe signal intensity | 1 | 477 |
| nssv2837547 | copy number loss | NA21477 | Oligo aCGH | Probe signal intensity | 1 | 474 |
| nssv2837548 | copy number loss | NA21489 | Oligo aCGH | Probe signal intensity | 1 | 440 |
| nssv2837549 | copy number loss | NA21490 | Oligo aCGH | Probe signal intensity | 1 | 471 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2837523 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837524 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837525 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837526 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837527 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837528 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837529 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837530 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837531 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837532 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837533 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837534 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837535 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837536 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837537 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837538 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837539 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837540 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837541 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837542 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837543 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837544 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837545 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837546 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837547 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837548 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837549 | Remapped | Perfect | NC_000018.10:g.(?_ 67629047)_(6764981 5_?)del | GRCh38.p12 | First Pass | NC_000018.10 | Chr18 | 67,629,047 | 67,649,815 |
| nssv2837523 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837524 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837525 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837526 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837527 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837528 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837529 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837530 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837531 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837532 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837533 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837534 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837535 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837536 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837537 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837538 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837539 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837540 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837541 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837542 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837543 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837544 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837545 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837546 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837547 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837548 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837549 | Remapped | Perfect | NC_000018.9:g.(?_6 5296284)_(65317052 _?)del | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 65,296,284 | 65,317,052 |
| nssv2837523 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837524 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837525 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837526 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837527 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837528 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837529 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837530 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837531 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837532 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837533 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837534 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837535 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837536 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837537 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837538 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837539 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837540 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837541 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837542 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837543 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837544 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837545 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837546 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837547 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837548 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 | ||
| nssv2837549 | Submitted genomic | NC_000018.8:g.(?_6 3447264)_(63468032 _?)del | NCBI36 (hg18) | NC_000018.8 | Chr18 | 63,447,264 | 63,468,032 |