nsv515072
- Organism: Homo sapiens
- Study:nstd46 (Campbell et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:10
- Validation:Not tested
- Clinical Assertions: No
- Region Size:84,913
- Publication(s):Campbell et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1038 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 1038 SVs from 74 studies. See in: genome view
Overlapping variant regions from other studies: 400 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv515072 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nsv515072 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nsv515072 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Copy number | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| nssv2957558 | copy number loss | NA07357 | Oligo aCGH | Probe signal intensity | 1 | 508 |
| nssv2957559 | copy number loss | NA10835 | Oligo aCGH | Probe signal intensity | 1 | 494 |
| nssv2957560 | copy number loss | NA11832 | Oligo aCGH | Probe signal intensity | 1 | 448 |
| nssv2957561 | copy number loss | NA12056 | Oligo aCGH | Probe signal intensity | 1 | 498 |
| nssv2957562 | copy number loss | NA12249 | Oligo aCGH | Probe signal intensity | 1 | 457 |
| nssv2957563 | copy number loss | NA12336 | Oligo aCGH | Probe signal intensity | 1 | 426 |
| nssv2957564 | copy number loss | NA12343 | Oligo aCGH | Probe signal intensity | 1 | 428 |
| nssv2957565 | copy number loss | NA12766 | Oligo aCGH | Probe signal intensity | 1 | 477 |
| nssv2957566 | copy number loss | NA12775 | Oligo aCGH | Probe signal intensity | 1 | 455 |
| nssv2957567 | copy number loss | NA12874 | Oligo aCGH | Probe signal intensity | 1 | 477 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv2957558 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957559 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957560 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957561 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957562 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957563 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957564 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957565 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957566 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957567 | Remapped | Perfect | NC_000008.11:g.(?_ 136756175)_(136841 087_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,756,175 | 136,841,087 |
| nssv2957558 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957559 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957560 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957561 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957562 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957563 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957564 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957565 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957566 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957567 | Remapped | Perfect | NC_000008.10:g.(?_ 137768418)_(137853 330_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,768,418 | 137,853,330 |
| nssv2957558 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957559 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957560 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957561 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957562 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957563 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957564 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957565 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957566 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 | ||
| nssv2957567 | Submitted genomic | NC_000008.9:g.(?_1 37837600)_(1379225 12_?)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,837,600 | 137,922,512 |