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dbVar

Database of genomic structural variation

nsv515481

Organism: Homo sapiens

Study:nstd55 (Zhu et al. 2011)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37 (hg19)

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:7,991

Publication(s):Zhu et al. 2011

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 616 SVs from 51 studies. See in: genome view

Remapped(Score: Perfect):140,412,828-140,420,818

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv515481	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	140,412,828	140,420,818
nsv515481	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	139,494,993	139,502,983

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis
nssv650717	deletion	GIP024	Sequencing	Sequence alignment
nssv650718	deletion	GIP124	Sequencing	Sequence alignment
nssv650719	deletion	GIP163	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv650717	Remapped	Perfect	NC_000023.11:g.140 412828_140420818de l	GRCh38.p12	First Pass	NC_000023.11	ChrX	140,412,828	140,420,818
nssv650718	Remapped	Perfect	NC_000023.11:g.140 412828_140420818de l	GRCh38.p12	First Pass	NC_000023.11	ChrX	140,412,828	140,420,818
nssv650719	Remapped	Perfect	NC_000023.11:g.140 412828_140420818de l	GRCh38.p12	First Pass	NC_000023.11	ChrX	140,412,828	140,420,818
nssv650717	Submitted genomic		NC_000023.10:g.139 494993_139502983de l	GRCh37 (hg19)		NC_000023.10	ChrX	139,494,993	139,502,983
nssv650718	Submitted genomic		NC_000023.10:g.139 494993_139502983de l	GRCh37 (hg19)		NC_000023.10	ChrX	139,494,993	139,502,983
nssv650719	Submitted genomic		NC_000023.10:g.139 494993_139502983de l	GRCh37 (hg19)		NC_000023.10	ChrX	139,494,993	139,502,983

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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