nsv5212061
- Organism: Homo sapiens
- Study:nstd204 (Chen et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:42,761
- Publication(s):Chen et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 633 SVs from 66 studies. See in: genome view
Overlapping variant regions from other studies: 764 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 118 SVs from 34 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5212061 | Submitted genomic | GRCh38.p13 | Primary Assembly | NC_000001.11 | Chr1 | 147,600,000 | 147,642,760 | ||
| nsv5212061 | Remapped | Good | GRCh37.p13 | Primary Assembly | Second Pass | NC_000001.10 | Chr1 | 147,071,792 | 147,114,560 |
| nsv5212061 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_003871055.3 | Chr1|NW_00 3871055.3 | 4,415,413 | 4,458,173 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16786638 | copy number variation | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv16786638 | Submitted genomic | GRCh38.p13 | NC_000001.11 | Chr1 | 147,600,000 | 147,642,760 | ||
| nssv16786638 | Remapped | Perfect | GRCh37.p13 | First Pass | NW_003871055.3 | Chr1|NW_00 3871055.3 | 4,415,413 | 4,458,173 |
| nssv16786638 | Remapped | Good | GRCh37.p13 | Second Pass | NC_000001.10 | Chr1 | 147,071,792 | 147,114,560 |