nsv5234296
- Organism: Homo sapiens
- Study:nstd204 (Chen et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:9,700
- Publication(s):Chen et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 313 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 311 SVs from 62 studies. See in: genome view
Overlapping variant regions from other studies: 152 SVs from 33 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5234296 | Submitted genomic | GRCh38.p13 | Primary Assembly | NC_000005.10 | Chr5 | 141,170,201 | 141,179,900 | ||
| nsv5234296 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | Second Pass | NC_000005.9 | Chr5 | 140,549,782 | 140,559,481 |
| nsv5234296 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_004775428.1 | Chr5|NW_00 4775428.1 | 405,377 | 415,076 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16852760 | copy number variation | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv16852760 | Submitted genomic | GRCh38.p13 | NC_000005.10 | Chr5 | 141,170,201 | 141,179,900 | ||
| nssv16852760 | Remapped | Perfect | GRCh37.p13 | First Pass | NW_004775428.1 | Chr5|NW_00 4775428.1 | 405,377 | 415,076 |
| nssv16852760 | Remapped | Perfect | GRCh37.p13 | Second Pass | NC_000005.9 | Chr5 | 140,549,782 | 140,559,481 |