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dbVar

Database of genomic structural variation

nsv5239279

Organism: Homo sapiens

Study:nstd204 (Chen et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,900

Publication(s):Chen et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 126 SVs from 31 studies. See in: genome view

Submitted genomic140,624,701-140,628,600

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5239279	Submitted genomic		GRCh38.p13	Primary Assembly		NC_000005.10	Chr5	140,624,701	140,628,600
nsv5239279	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	140,004,286	140,008,185

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16837668	copy number variation	Sequencing	Read depth

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16837668	Submitted genomic		GRCh38.p13		NC_000005.10	Chr5	140,624,701	140,628,600
nssv16837668	Remapped	Perfect	GRCh37.p13	First Pass	NC_000005.9	Chr5	140,004,286	140,008,185

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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