nsv5261405
- Organism: Homo sapiens
- Study:nstd204 (Chen et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:171,300
- Publication(s):Chen et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 806 SVs from 72 studies. See in: genome view
Overlapping variant regions from other studies: 544 SVs from 65 studies. See in: genome view
Overlapping variant regions from other studies: 177 SVs from 24 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5261405 | Submitted genomic | GRCh38.p13 | Primary Assembly | NC_000012.12 | Chr12 | 6,720,401 | 6,891,700 | ||
| nsv5261405 | Remapped | Pass | GRCh37.p13 | Primary Assembly | Second Pass | NC_000012.11 | Chr12 | 6,907,581 | 7,000,864 |
| nsv5261405 | Remapped | Pass | GRCh37.p13 | PATCHES | First Pass | NW_003871083.2 | Chr12|NW_0 03871083.2 | 1 | 93,284 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16829244 | copy number variation | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv16829244 | Submitted genomic | GRCh38.p13 | NC_000012.12 | Chr12 | 6,720,401 | 6,891,700 | ||
| nssv16829244 | Remapped | Pass | GRCh37.p13 | First Pass | NW_003871083.2 | Chr12|NW_0 03871083.2 | 1 | 93,284 |
| nssv16829244 | Remapped | Pass | GRCh37.p13 | Second Pass | NC_000012.11 | Chr12 | 6,907,581 | 7,000,864 |