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nsv5308478

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:5,189

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 311 SVs from 60 studies. See in: genome view    
Submitted genomic141,174,577-141,179,804Question Mark
Overlapping variant regions from other studies: 309 SVs from 60 studies. See in: genome view    
Remapped(Score: Perfect):140,554,158-140,559,385Question Mark
Overlapping variant regions from other studies: 150 SVs from 31 studies. See in: genome view    
Remapped(Score: Perfect):409,753-414,980Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
nsv5308478Submitted genomicGRCh38.p13Primary AssemblyNC_000005.10Chr5141,174,594 (-17, +1)141,179,782 (-3, +22)
nsv5308478RemappedPerfectGRCh37.p13Primary AssemblySecond PassNC_000005.9Chr5140,554,175 (-17, +1)140,559,363 (-3, +22)
nsv5308478RemappedPerfectGRCh37.p13PATCHESFirst PassNW_004775428.1Chr5|NW_00
4775428.1
409,770 (-17, +1)414,958 (-3, +22)

Variant Call Information

Variant Call IDTypeMethodAnalysis
nssv16738131duplicationSequencingSplit read and paired-end mapping

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
nssv16738131Submitted genomicNC_000005.10:g.(14
1174577_141174595)
_(141179779_141179
804)dup
GRCh38.p13NC_000005.10Chr5141,174,594 (-17, +1)141,179,782 (-3, +22)
nssv16738131RemappedPerfectNW_004775428.1:g.(
409753_409771)_(41
4955_414980)dup
GRCh37.p13First PassNW_004775428.1Chr5|NW_00
4775428.1
409,770 (-17, +1)414,958 (-3, +22)
nssv16738131RemappedPerfectNC_000005.9:g.(140
554158_140554176)_
(140559360_1405593
85)dup
GRCh37.p13Second PassNC_000005.9Chr5140,554,175 (-17, +1)140,559,363 (-3, +22)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call IDAllele Frequency (AF)
nssv167381310.235
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