nsv5327738
- Organism: Homo sapiens
- Study:nstd204 (Chen et al. 2021)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:6,006
- Publication(s):Chen et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 187 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 187 SVs from 50 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5327738 | Submitted genomic | GRCh38.p13 | Primary Assembly | NC_000010.11 | Chr10 | 55,007,429 | 55,013,434 (+1) | ||
| nsv5327738 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 56,767,189 | 56,773,194 (+1) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16752366 | inversion | Sequencing | Split read and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16752366 | Submitted genomic | NC_000010.11:g.550 07429_(?_55013435) inv | GRCh38.p13 | NC_000010.11 | Chr10 | 55,007,429 | 55,013,434 (+1) | ||
| nssv16752366 | Remapped | Perfect | NC_000010.10:g.567 67189_(?_56773195) inv | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 56,767,189 | 56,773,194 (+1) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) |
|---|---|
| nssv16752366 | 0.033 |