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dbVar

Database of genomic structural variation

nsv5384999

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:340

Description:nsv4784326 from Abel et. al 2020. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 135 SVs from 32 studies. See in: genome view

Remapped(Score: Perfect):155,874,907-155,875,246

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5384999	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	155,874,907	155,875,246
nsv5384999	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	155,844,698	155,845,037

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16884865	deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16884865	Remapped	Perfect	NC_000001.11:g.155 874907_155875246de l	GRCh38.p12	First Pass	NC_000001.11	Chr1	155,874,907	155,875,246
nssv16884865	Submitted genomic		NC_000001.10:g.155 844698_155845037de l	GRCh37 (hg19)		NC_000001.10	Chr1	155,844,698	155,845,037

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16884865	0.095	1606	16834

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