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dbVar

Database of genomic structural variation

nsv5388208

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:208

Description:nsv4790165 from Abel et. al 2020. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 288 SVs from 35 studies. See in: genome view

Remapped(Score: Perfect):241,115,924-241,116,131

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5388208	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000002.12	Chr2	241,115,924	241,116,131
nsv5388208	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000002.11	Chr2	242,055,339	242,055,546

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16880216	deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16880216	Remapped	Perfect	NC_000002.12:g.241 115924_241116131de l	GRCh38.p12	First Pass	NC_000002.12	Chr2	241,115,924	241,116,131
nssv16880216	Submitted genomic		NC_000002.11:g.242 055339_242055546de l	GRCh37 (hg19)		NC_000002.11	Chr2	242,055,339	242,055,546

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16880216	0.115	1929	16834

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