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dbVar

Database of genomic structural variation

nsv5410615

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 106 SVs from 25 studies. See in: genome view

Submitted genomic35,847,984-35,848,035

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5410615	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	35,847,984	35,848,035
nsv5410615	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	36,313,585	36,313,636

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16903708	alu insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16903708	Submitted genomic		NC_000001.11:g.358 47984_35848035ins2 81	GRCh38 (hg38)		NC_000001.11	Chr1	35,847,984	35,848,035
nssv16903708	Remapped	Perfect	NC_000001.10:g.363 13585_36313636ins2 81	GRCh37.p13	First Pass	NC_000001.10	Chr1	36,313,585	36,313,636

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16903708	0.013	84	6404

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