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dbVar

Database of genomic structural variation

nsv5421867

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 131 SVs from 31 studies. See in: genome view

Submitted genomic56,512,210-56,512,261

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5421867	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	56,512,210	56,512,261
nsv5421867	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	57,023,579	57,023,630

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17725795	alu insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17725795	Submitted genomic		NC_000019.10:g.565 12210_56512261ins2 81	GRCh38 (hg38)		NC_000019.10	Chr19	56,512,210	56,512,261
nssv17725795	Remapped	Perfect	NC_000019.9:g.5702 3579_57023630ins28 1	GRCh37.p13	First Pass	NC_000019.9	Chr19	57,023,579	57,023,630

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17725795	0.16	1022	6404

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