Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5425827

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 110 SVs from 27 studies. See in: genome view

Submitted genomic72,347,196-72,347,196

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5425827	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	72,347,196	72,347,196
nsv5425827	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	72,639,537	72,639,537

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17702431	alu insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17702431	Submitted genomic		NC_000015.10:g.723 47196_72347197ins3 21	GRCh38 (hg38)		NC_000015.10	Chr15	72,347,196	72,347,196
nssv17702431	Remapped	Perfect	NC_000015.9:g.7263 9537_72639538ins32 1	GRCh37.p13	First Pass	NC_000015.9	Chr15	72,639,537	72,639,537

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17702431	0.715	4436	6206

You are here: NCBI