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dbVar

Database of genomic structural variation

nsv5454106

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 100 SVs from 18 studies. See in: genome view

Submitted genomic36,921,697-36,921,748

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5454106	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	36,921,697	36,921,748
nsv5454106	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	36,889,473	36,889,524

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16982092	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16982092	Submitted genomic		NC_000006.12:g.369 21697_36921748del	GRCh38 (hg38)		NC_000006.12	Chr6	36,921,697	36,921,748
nssv16982092	Remapped	Perfect	NC_000006.11:g.368 89473_36889524del	GRCh37.p13	First Pass	NC_000006.11	Chr6	36,889,473	36,889,524

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16982092	0.003	20	6400

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