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dbVar

Database of genomic structural variation

nsv5462898

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:64

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 98 SVs from 19 studies. See in: genome view

Submitted genomic134,947,969-134,948,032

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5462898	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	134,947,969	134,948,032
nsv5462898	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	134,283,659	134,283,722

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16975085	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16975085	Submitted genomic		NC_000005.10:g.134 947969_134948032du p	GRCh38 (hg38)		NC_000005.10	Chr5	134,947,969	134,948,032
nssv16975085	Remapped	Perfect	NC_000005.9:g.1342 83659_134283722dup	GRCh37.p13	First Pass	NC_000005.9	Chr5	134,283,659	134,283,722

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16975085	0.004	28	6402

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