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dbVar

Database of genomic structural variation

nsv5471001

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:101

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 149 SVs from 31 studies. See in: genome view

Submitted genomic31,932,551-31,932,651

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5471001	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	31,932,551	31,932,651
nsv5471001	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	31,900,328	31,900,428

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16981935	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16981935	Submitted genomic		NC_000006.12:g.319 32551_31932651del	GRCh38 (hg38)		NC_000006.12	Chr6	31,932,551	31,932,651
nssv16981935	Remapped	Perfect	NC_000006.11:g.319 00328_31900428del	GRCh37.p13	First Pass	NC_000006.11	Chr6	31,900,328	31,900,428

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16981935	0.054	345	6378

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