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dbVar

Database of genomic structural variation

nsv5472040

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:64

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 117 SVs from 44 studies. See in: genome view

Submitted genomic22,163,158-22,163,221

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5472040	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	22,163,158	22,163,221
nsv5472040	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	22,202,776	22,202,839

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16993875	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16993875	Submitted genomic		NC_000007.14:g.221 63158_22163221del	GRCh38 (hg38)		NC_000007.14	Chr7	22,163,158	22,163,221
nssv16993875	Remapped	Perfect	NC_000007.13:g.222 02776_22202839del	GRCh37.p13	First Pass	NC_000007.13	Chr7	22,202,776	22,202,839

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16993875	0.714	4555	6378

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