nsv5484680
- Organism: Homo sapiens
- Study:nstd206 (Byrska-Bishop et al. 2022)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:176
- Publication(s):Byrska-Bishop et al. 2022
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 190 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 30 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5484680 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000010.11 | Chr10 | 50,076,707 | 50,076,882 | ||
| nsv5484680 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_004504302.1 | Chr10|NW_0 04504302.1 | 255,882 | 256,057 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17034661 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17034661 | Submitted genomic | NC_000010.11:g.500 76707_50076882dup | GRCh38 (hg38) | NC_000010.11 | Chr10 | 50,076,707 | 50,076,882 | ||
| nssv17034661 | Remapped | Perfect | NW_004504302.1:g.2 55882_256057dup | GRCh37.p13 | First Pass | NW_004504302.1 | Chr10|NW_0 04504302.1 | 255,882 | 256,057 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv17034661 | 0.031 | 174 | 6350 |