nsv5501133
- Organism: Homo sapiens
- Study:nstd206 (Byrska-Bishop et al. 2022)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:15,491
- Publication(s):Byrska-Bishop et al. 2022
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 132 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 132 SVs from 38 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5501133 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 18,584,724 (-100, +268) | 18,600,214 (-312, +53) | ||
| nsv5501133 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 18,606,271 (-100, +268) | 18,621,761 (-312, +53) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17044661 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17044661 | Submitted genomic | NC_000011.10:g.(18 584624_18584992)_( 18599902_18600267) del | GRCh38 (hg38) | NC_000011.10 | Chr11 | 18,584,724 (-100, +268) | 18,600,214 (-312, +53) | ||
| nssv17044661 | Remapped | Perfect | NC_000011.9:g.(186 06171_18606539)_(1 8621449_18621814)d el | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 18,606,271 (-100, +268) | 18,621,761 (-312, +53) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv17044661 | <0.001 | 5 | 6404 |