nsv5526
- Organism: Homo sapiens
- Study:nstd2 (Kidd et al. 2008)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:59,267
- Publication(s):Kidd et al. 2008
- TRACE: TEMPLATE_ID='1207854_ABC14_4_1_000000974714_B21'
- TRACE: TEMPLATE_ID='1210216_ABC14_4_1_000050413600_F17'
- TRACE: TEMPLATE_ID='1210216_ABC14_4_1_000050414500_M16'
- TRACE: TEMPLATE_ID='170215_ABC9_3_2_000041287700_B11'
- TRACE: TEMPLATE_ID='170215_ABC9_3_2_000041295900_L21'
- TRACE: TEMPLATE_ID='171515_ABC9_3_5_000043958300_G14'
- TRACE: TEMPLATE_ID='172343_ABC9_3_5_000043977100_H6'
- Overlapping Genes
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 313 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 313 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 9 SVs from 3 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5526 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 147,822,855 | 147,882,121 |
nsv5526 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 148,143,991 | 148,203,257 |
nsv5526 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000006.9 | Chr6 | 148,185,684 | 148,244,950 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
nssv6094 | Remapped | Perfect | NC_000006.12:g.(14 7822855_?)_(?_1478 51896)ins7980 | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 147,822,855 | 147,851,896 |
nssv10520 | Remapped | Perfect | NC_000006.12:g.(14 7851879_?)_(?_1478 82121)ins6407 | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 147,851,879 | 147,882,121 |
nssv6094 | Remapped | Perfect | NC_000006.11:g.(14 8143991_?)_(?_1481 73032)ins7980 | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 148,143,991 | 148,173,032 |
nssv10520 | Remapped | Perfect | NC_000006.11:g.(14 8173015_?)_(?_1482 03257)ins6407 | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 148,173,015 | 148,203,257 |
nssv6094 | Submitted genomic | NC_000006.9:g.(148 185684_?)_(?_14821 4725)ins7980 | NCBI35 (hg17) | NC_000006.9 | Chr6 | 148,185,684 | 148,214,725 | ||
nssv10520 | Submitted genomic | NC_000006.9:g.(148 214708_?)_(?_14824 4950)ins6407 | NCBI35 (hg17) | NC_000006.9 | Chr6 | 148,214,708 | 148,244,950 |