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dbVar

Database of genomic structural variation

nsv5532506

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,183

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 108 SVs from 18 studies. See in: genome view

Submitted genomic35,639,522-35,640,704

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5532506	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	35,639,522	35,640,704
nsv5532506	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	36,130,424	36,131,606

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17723025	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17723025	Submitted genomic		NC_000019.10:g.356 39522_35640704del	GRCh38 (hg38)		NC_000019.10	Chr19	35,639,522	35,640,704
nssv17723025	Remapped	Perfect	NC_000019.9:g.3613 0424_36131606del	GRCh37.p13	First Pass	NC_000019.9	Chr19	36,130,424	36,131,606

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17723025	<0.001	2	6404

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