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dbVar

Database of genomic structural variation

nsv5539509

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:244

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 166 SVs from 39 studies. See in: genome view

Submitted genomic52,915,226-52,915,469

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5539509	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	52,915,226	52,915,469
nsv5539509	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	53,418,479	53,418,722

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17724251	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17724251	Submitted genomic		NC_000019.10:g.529 15226_52915469ins2 26	GRCh38 (hg38)		NC_000019.10	Chr19	52,915,226	52,915,469
nssv17724251	Remapped	Perfect	NC_000019.9:g.5341 8479_53418722ins22 6	GRCh37.p13	First Pass	NC_000019.9	Chr19	53,418,479	53,418,722

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17724251	0.005	29	6402

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