nsv5555008
- Organism: Homo sapiens
- Study:nstd206 (Byrska-Bishop et al. 2022)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:78,963
- Publication(s):Byrska-Bishop et al. 2022
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 353 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 353 SVs from 36 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5555008 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000018.10 | Chr18 | 43,909,957 (-20, +18) | 43,988,919 (-20, +14) | ||
| nsv5555008 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 41,489,922 (-20, +18) | 41,568,884 (-20, +14) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17717783 | inversion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17717783 | Submitted genomic | NC_000018.10:g.(43 909937_43909975)_( 43988899_43988933) inv | GRCh38 (hg38) | NC_000018.10 | Chr18 | 43,909,957 (-20, +18) | 43,988,919 (-20, +14) | ||
| nssv17717783 | Remapped | Perfect | NC_000018.9:g.(414 89902_41489940)_(4 1568864_41568898)i nv | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 41,489,922 (-20, +18) | 41,568,884 (-20, +14) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv17717783 | <0.001 | 2 | 6404 |