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dbVar

Database of genomic structural variation

nsv5555882

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:sequence alteration
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:692,716

Description:complex variant
Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2462 SVs from 84 studies. See in: genome view

Submitted genomic45,580,124-46,272,839

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5555882	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	45,580,124	46,272,839
nsv5555882	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	46,083,382	46,776,096

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17723589	sequence alteration	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17723589	Submitted genomic		GRCh38 (hg38)		NC_000019.10	Chr19	45,580,124	46,272,839
nssv17723589	Remapped	Perfect	GRCh37.p13	First Pass	NC_000019.9	Chr19	46,083,382	46,776,096

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17723589	<0.001	2	6404

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