nsv5557062
- Organism: Homo sapiens
- Study:nstd206 (Byrska-Bishop et al. 2022)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:434
- Publication(s):Byrska-Bishop et al. 2022
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 143 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 144 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5557062 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 112,663,483 (-20, +20) | 112,663,916 (-20, +20) | ||
| nsv5557062 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 113,206,105 (-20, +20) | 113,206,538 (-20, +20) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16908926 | inversion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16908926 | Submitted genomic | NC_000001.11:g.(11 2663463_112663503) _(112663896_112663 936)inv | GRCh38 (hg38) | NC_000001.11 | Chr1 | 112,663,483 (-20, +20) | 112,663,916 (-20, +20) | ||
| nssv16908926 | Remapped | Perfect | NC_000001.10:g.(11 3206085_113206125) _(113206518_113206 558)inv | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 113,206,105 (-20, +20) | 113,206,538 (-20, +20) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16908926 | 0.005 | 32 | 6404 |