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dbVar

Database of genomic structural variation

nsv5562014

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:sequence alteration
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:88,668

Description:complex variant
Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 456 SVs from 58 studies. See in: genome view

Submitted genomic101,672,221-101,760,888

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5562014	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	101,672,221	101,760,888
nsv5562014	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	101,007,925	101,096,592

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16972503	sequence alteration	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16972503	Submitted genomic		GRCh38 (hg38)		NC_000005.10	Chr5	101,672,221	101,760,888
nssv16972503	Remapped	Perfect	GRCh37.p13	First Pass	NC_000005.9	Chr5	101,007,925	101,096,592

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16972503	<0.001	2	6404

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