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dbVar

Database of genomic structural variation

nsv5572480

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:54

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 85 SVs from 20 studies. See in: genome view

Submitted genomic38,928,129-38,928,182

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5572480	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	38,928,129	38,928,182
nsv5572480	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	38,928,231	38,928,284

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17127002	deletion	HG03065	Sequencing	Sequence alignment	3,836

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17127002	Submitted genomic		NC_000005.10:g.389 28129_38928182delG	GRCh38 (hg38)		NC_000005.10	Chr5	38,928,129	38,928,182
nssv17127002	Remapped	Perfect	NC_000005.9:g.3892 8231_38928284delG	GRCh37.p13	First Pass	NC_000005.9	Chr5	38,928,231	38,928,284

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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