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dbVar

Database of genomic structural variation

nsv5572874

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:50

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 105 SVs from 33 studies. See in: genome view

Submitted genomic45,108,816-45,108,865

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5572874	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	45,108,816	45,108,865
nsv5572874	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	45,150,308	45,150,357

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17137733	deletion	HG03486	Sequencing	Sequence alignment	4,355

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17137733	Submitted genomic		NC_000003.12:g.451 08816_45108865delC	GRCh38 (hg38)		NC_000003.12	Chr3	45,108,816	45,108,865
nssv17137733	Remapped	Perfect	NC_000003.11:g.451 50308_45150357delC	GRCh37.p13	First Pass	NC_000003.11	Chr3	45,150,308	45,150,357

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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