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dbVar

Database of genomic structural variation

nsv5580846

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:71,559

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 864 SVs from 77 studies. See in: genome view

Submitted genomic105,096,412-105,167,970

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5580846	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	105,096,412	105,167,970
nsv5580846	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	104,432,113	104,503,671

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17139282	deletion	SAMN00801888	Sequencing	Sequence alignment	2,004

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17139282	Submitted genomic		NC_000005.10:g.105 096412_105167970de lG	GRCh38 (hg38)		NC_000005.10	Chr5	105,096,412	105,167,970
nssv17139282	Remapped	Perfect	NC_000005.9:g.1044 32113_104503671del G	GRCh37.p13	First Pass	NC_000005.9	Chr5	104,432,113	104,503,671

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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