nsv5582165
- Organism: Homo sapiens
- Study:nstd207 (Ebert et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:196
- Publication(s):Ebert et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 142 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 141 SVs from 39 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5582165 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000006.12 | Chr6 | 26,915,628 | 26,915,823 | ||
| nsv5582165 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 26,883,407 | 26,883,602 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17150520 | deletion | SAMN01096687 | Sequencing | Sequence alignment | 1,334 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17150520 | Submitted genomic | NC_000006.12:g.269 15628_26915823delT | GRCh38 (hg38) | NC_000006.12 | Chr6 | 26,915,628 | 26,915,823 | ||
| nssv17150520 | Remapped | Perfect | NC_000006.11:g.268 83407_26883602delT | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 26,883,407 | 26,883,602 |