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dbVar

Database of genomic structural variation

nsv5586642

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:83

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 136 SVs from 29 studies. See in: genome view

Submitted genomic56,445,079-56,445,161

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5586642	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	56,445,079	56,445,161
nsv5586642	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	56,956,448	56,956,530

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17106416	deletion	SAMN00006579	Sequencing	Sequence alignment	23,265

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17106416	Submitted genomic		NC_000019.10:g.564 45079_56445161delG	GRCh38 (hg38)		NC_000019.10	Chr19	56,445,079	56,445,161
nssv17106416	Remapped	Perfect	NC_000019.9:g.5695 6448_56956530delG	GRCh37.p13	First Pass	NC_000019.9	Chr19	56,956,448	56,956,530

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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