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dbVar

Database of genomic structural variation

nsv5587933

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,054

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 278 SVs from 61 studies. See in: genome view

Submitted genomic12,584,062-12,588,115

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5587933	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	12,584,062	12,588,115
nsv5587933	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	12,694,876	12,698,929

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17103549	deletion	SAMN00006579	Sequencing	Sequence alignment	23,265

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17103549	Submitted genomic		NC_000019.10:g.125 84062_12588115delG	GRCh38 (hg38)		NC_000019.10	Chr19	12,584,062	12,588,115
nssv17103549	Remapped	Perfect	NC_000019.9:g.1269 4876_12698929delG	GRCh37.p13	First Pass	NC_000019.9	Chr19	12,694,876	12,698,929

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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