nsv5588377
- Organism: Homo sapiens
- Study:nstd207 (Ebert et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:89
- Publication(s):Ebert et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 114 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 114 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5588377 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000009.12 | Chr9 | 122,867,827 | 122,867,915 | ||
nsv5588377 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 125,630,106 | 125,630,194 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv17159902 | deletion | SAMN00001694 | Sequencing | Sequence alignment | 8,610 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17159902 | Submitted genomic | NC_000009.12:g.122 867827_122867915de lG | GRCh38 (hg38) | NC_000009.12 | Chr9 | 122,867,827 | 122,867,915 | ||
nssv17159902 | Remapped | Perfect | NC_000009.11:g.125 630106_125630194de lG | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 125,630,106 | 125,630,194 |