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dbVar

Database of genomic structural variation

nsv5598572

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:61

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 165 SVs from 33 studies. See in: genome view

Submitted genomic88,652,389-88,652,449

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5598572	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	88,652,389	88,652,449
nsv5598572	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	89,195,620	89,195,680

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17080532	deletion	SAMN00006579	Sequencing	Sequence alignment	23,265

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17080532	Submitted genomic		NC_000015.10:g.886 52389_88652449delC	GRCh38 (hg38)		NC_000015.10	Chr15	88,652,389	88,652,449
nssv17080532	Remapped	Perfect	NC_000015.9:g.8919 5620_89195680delC	GRCh37.p13	First Pass	NC_000015.9	Chr15	89,195,620	89,195,680

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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