nsv5623358
- Organism: Homo sapiens
- Study:nstd207 (Ebert et al. 2021)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Ebert et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 116 SVs from 26 studies. See in: genome view
Overlapping variant regions from other studies: 116 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5623358 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000003.12 | Chr3 | 179,121,486 | 179,121,486 | ||
| nsv5623358 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 178,839,274 | 178,839,274 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17120698 | insertion | HG03683 | Sequencing | Sequence alignment | 2,232 |
| nssv17126555 | insertion | SAMN00006579 | Sequencing | Sequence alignment | 23,265 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17120698 | Submitted genomic | NC_000003.12:g.179 121486_179121487in s478 | GRCh38 (hg38) | NC_000003.12 | Chr3 | 179,121,486 | 179,121,486 | ||
| nssv17126555 | Submitted genomic | NC_000003.12:g.179 121486_179121487in s69 | GRCh38 (hg38) | NC_000003.12 | Chr3 | 179,121,486 | 179,121,486 | ||
| nssv17120698 | Remapped | Perfect | NC_000003.11:g.178 839274_178839275in s478 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 178,839,274 | 178,839,274 |
| nssv17126555 | Remapped | Perfect | NC_000003.11:g.178 839274_178839275in s69 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 178,839,274 | 178,839,274 |