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dbVar

Database of genomic structural variation

nsv5669419

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:inversion
Method Type:Optical mapping, Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:185,078

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1751 SVs from 100 studies. See in: genome view

Submitted genomic16,761,852-16,946,929

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5669419	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	16,761,852	16,946,929
nsv5669419	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	17,088,347	17,273,424

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17061756	inversion	SAMN00006579	Optical mapping, Sequencing	Optical mapping, Sequence alignment	23,265

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17061756	Submitted genomic		NC_000001.11:g.167 61852_16946929inv	GRCh38 (hg38)		NC_000001.11	Chr1	16,761,852	16,946,929
nssv17061756	Remapped	Perfect	NC_000001.10:g.170 88347_17273424inv	GRCh37.p13	First Pass	NC_000001.10	Chr1	17,088,347	17,273,424

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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