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dbVar

Database of genomic structural variation

nsv5669492

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:inversion
Method Type:Optical mapping, Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:24,066

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 406 SVs from 68 studies. See in: genome view

Submitted genomic25,338,356-25,362,421

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5669492	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	25,338,356	25,362,421
nsv5669492	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	25,664,847	25,688,912

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17064639	inversion	SAMN00249812	Optical mapping, Sequencing	Optical mapping, Sequence alignment	1,255

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17064639	Submitted genomic		NC_000001.11:g.253 38356_25362421inv	GRCh38 (hg38)		NC_000001.11	Chr1	25,338,356	25,362,421
nssv17064639	Remapped	Perfect	NC_000001.10:g.256 64847_25688912inv	GRCh37.p13	First Pass	NC_000001.10	Chr1	25,664,847	25,688,912

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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