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dbVar

Database of genomic structural variation

nsv5676410

Organism: Homo sapiens

Study:nstd211 (Chuang et al. 2021)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:Insertion of a Alu mobile element relative to the reference
Publication(s):Chuang et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 196 SVs from 40 studies. See in: genome view

Submitted genomic92,005,018-92,005,018

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5676410	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	92,005,018	92,005,018
nsv5676410	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	92,470,575	92,470,575

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17174742	alu insertion	Sequencing	Other
nssv17204673	alu insertion	Sequencing	Other

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17174742	Submitted genomic		NC_000001.11:g.920 05018_92005019ins2 81	GRCh38 (hg38)		NC_000001.11	Chr1	92,005,018	92,005,018
nssv17204673	Submitted genomic		NC_000001.11:g.920 05018_92005019ins2 81	GRCh38 (hg38)		NC_000001.11	Chr1	92,005,018	92,005,018
nssv17174742	Remapped	Perfect	NC_000001.10:g.924 70575_92470576ins2 81	GRCh37.p13	First Pass	NC_000001.10	Chr1	92,470,575	92,470,575
nssv17204673	Remapped	Perfect	NC_000001.10:g.924 70575_92470576ins2 81	GRCh37.p13	First Pass	NC_000001.10	Chr1	92,470,575	92,470,575

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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